Research output per year
Research output per year
Personal profile
Research interests
Our research focuses on developing novel mathematical/quantitative theories and machine learning tools to understand the infection, transmission, evolutionary dynamics of viruses, and the immune responses across multiple scales of biological organization, i.e. at population, host and sometimes cellular and intracellular scales. Current research particularly focuses on HIV and SARS-CoV-2.
Education/Academic qualification
Mathematics, PHD, Imperial College London
Award Date: Jul 1 2010
Mathematics, BS, Heriot-Watt University
Award Date: Jul 1 2006
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Dive into the research topics where Ruian Ke, is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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How robust are estimates of key parameters in standard viral dynamic models?
Zitzmann, C., Ke, R., Ribeiro, R. M. & Perelson, A. S., Apr 2024, In: PLoS Computational Biology. 20, 4 April, e1011437.Research output: Contribution to journal › Article › peer-review
Open Access -
Modeling the emergence of viral resistance for SARS-CoV-2 during treatment with an anti-spike monoclonal antibody
Phan, T., Zitzmann, C., Chew, K. W., Smith, D. M., Daar, E. S., Wohl, D. A., Eron, J. J., Currier, J. S., Hughes, M. D., Choudhary, M. C., Deo, R., Li, J. Z., Ribeiro, R. M., Ke, R. & Perelson, A. S., Apr 2024, In: PLoS Pathogens. 20, 4 April, e1011680.Research output: Contribution to journal › Article › peer-review
Open Access -
AZD5582 plus SIV-specific antibodies reduce lymph node viral reservoirs in antiretroviral therapy-suppressed macaques
Dashti, A., Sukkestad, S., Horner, A. M., Neja, M., Siddiqi, Z., Waller, C., Goldy, J., Monroe, D., Lin, A., Schoof, N., Singh, V., Mavigner, M., Lifson, J. D., Deleage, C., Tuyishime, M., Falcinelli, S. D., King, H. A. D., Ke, R., Mason, R. D., Archin, N. M., & 9 others, Oct 2023, In: Nature Medicine. 29, 10, p. 2535-2546 12 p.Research output: Contribution to journal › Article › peer-review
Open Access7 Scopus citations -
Making waves: Integrating wastewater surveillance with dynamic modeling to track and predict viral outbreaks
Phan, T., Brozak, S., Pell, B., Oghuan, J., Gitter, A., Hu, T., Ribeiro, R. M., Ke, R., Mena, K. D., Perelson, A. S., Kuang, Y. & Wu, F., Sep 1 2023, In: Water Research. 243, 120372.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
Semi-infectious particles contribute substantially to influenza virus within-host dynamics when infection is dominated by spatial structure
Farrell, A., Phan, T., Brooke, C. B., Koelle, K. & Ke, R., 2023, In: Virus Evolution. 9, 1, vead020.Research output: Contribution to journal › Article › peer-review
Open Access
Prizes
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Lewis Wolpert Prize for Best Paper
Hengartner, Nicolas W (Recipient), Ke, Ruian (Recipient) & Romero-Severson, Ethan (Recipient), 2022
Prize: Award
Press/Media
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Work of Los Alamos scientists suggests COVID-19 can turn really bad again much faster than it got better
Grant David Meadors,, Ruian Ke, & Ethan Romero-Severson,
04/25/20
1 item of Media coverage
Press/Media
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Chinese province on alert amid second wave of COVID-19
Yen Ting Lin,, Chonggang Xu,, Ruian Ke, & Ethan Romero-Severson,
04/15/20
2 items of Media coverage
Press/Media
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