Research output per year
Research output per year
Personal profile
Education/Academic qualification
Microbiology/Bacteriology, PHD, Oregon State University
Award Date: Jan 11 2008
Biology, BS
Award Date: May 9 1998
Fingerprint
Dive into the research topics where Shawn Robert Starkenburg, is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
- 1 Similar Profiles
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The telomere-to-telomere, gapless, phased diploid genome and methylome of the green alga Scenedesmus obliquus UTEX 3031 reveals significant heterozygosity and genetic divergence of the haplotypes
Biondi, T. C., Kruse, C. P. S., Koehler, S. I., Kwon, T., Davis, A. K., Eng, W., Kunde, Y., Gleasner, C. D., You Mak, K. T., Polle, J., Hovde, B. T., Hanschen, E. R. & Starkenburg, S. R., Apr 2024, In: Algal Research. 79, 103431.Research output: Contribution to journal › Article › peer-review
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Development of a field-deployable qPCR assay for real-time pest monitoring in algal cultivation systems
Sanchez, M. R., Denning, E., Biondi, T. C., Hovde, B., Eacker, S., Getto, S., Kaur, H., Jebali, A., Echenique-Subiabre, I., Green, M., Gerber, J., Auch, B., Holguin, F. O., Liachko, I., Martinez, H., Balleza, M., Nalley, J., O'Kelly, C., Shurin, J. B., Corcoran, A. A., & 1 others, Jul 2023, In: Algal Research. 74, 103194.Research output: Contribution to journal › Article › peer-review
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DISCOVR strain pipeline screening – Part I: Maximum specific growth rate as a function of temperature and salinity for 38 candidate microalgae for biofuels production
Huesemann, M., Edmundson, S., Gao, S., Negi, S., Dale, T., Gutknecht, A., Daligault, H. E., Carr, C. K., Freeman, J., Kern, T., Starkenburg, S. R., Gleasner, C. D., Louie, W., Kruk, R. & McGuire, S., Apr 2023, In: Algal Research. 71, 102996.Research output: Contribution to journal › Article › peer-review
Open Access8 Scopus citations -
Improved quality metrics for association and reproducibility in chromatin accessibility data using mutual information
Roth, C., Venu, V., Job, V., Lubbers, N., Sanbonmatsu, K. Y., Steadman, C. R. & Starkenburg, S. R., Dec 2023, In: BMC Bioinformatics. 24, 1, 441.Research output: Contribution to journal › Article › peer-review
Open Access -
Site-specific factors override local climatic conditions in determining microalgae productivity in open raceway ponds
Echenique-Subiabre, I., Greene, J. M., Ryan, A., Martinez, H., Balleza, M., Gerber, J., Jebali, A., Getto, S., O'Kelly, C. J., Mandal, S., Quinn, J. C., Starkenburg, S. R., Corcoran, A. A. & Shurin, J. B., Jul 2023, In: Algal Research. 74, 103235.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations
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InCEPTIoN: Integrated OmiCs of Emergent Pathways for Therapeutic Intervention of New and Emerging Threats
Glaros, T. G., LeBrun, E. S., McBride, E. M., Schmidt, J. G., Starkenburg, S. R., Tondreau, A., Chain, P. S. G., Harris, J. F., Hlavacek, W. S., Hu, B., Mach, P. M., Sanders, C. K., Solomon, E. A. & Williams, R. F.
10/1/22 → 09/28/25
Project: Other
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Predicting Viral Phenotype from Genotype
Gans, J. D., Starkenburg, S. R., Kwon, T. & Biondi, T. C.
10/13/21 → 09/25/22
Project: Other
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A 4-Dimensional Human Genome Project: Accelerating the Next Generation of Biological Discovery
Starkenburg, S. R., Micheva-Viteva, S., Roth, C. J. N., Venu, V., Sanbonmatsu, K. Y., Estrada, T., Lappala, A., Lee, J. T., Schlick, T., Zhou, Z., Modl, D. G., Monroe, L. M., Rogers, D. H., Steadman, C. R., Singhal, A. & Watt, J. D.
10/1/20 → 09/30/23
Project: Other
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Center for Space and Earth Science (CSES): Foundational Research in Space and Earth Science
Danielson, L. R., Sevanto, S. A., Abolt, C. J., Ahmmed, B., Aiken, A. C., Bartlow, A. W., Bennett, K. E., Brown, M. J., Collins, A. D., Conroy, N. A., Dichosa, A. E. K., Dickman, L. T., Edelmann, P. V. F., Fair, J. M., Feeser, K. L., Fiorella, R. P., Ganguly, K., Glaros, T. G., Hanschen, E. R., Holmes, J. C., Hovde, B., Jonko, A., Larmat, C., Linn, R. R., McDanold, J. S., Mehana, M. Z. S., Neil, C. W., Ortiz, J. P., Rougier, E., Rowe, C. A., Schwenk, J. P., Solander, K. C., Starkenburg, S. R., Stauffer, P. H., Velappan, N., Xu, C., Zhang, Y., Huang, X., Thaler, E. A., Bilek, S., Boldyrev, S., Burrows, A., Chakraborty, S., Chiber, R., Cotrufo, F., Cuesta, M., Dinwiddie, D., Domman, D., Drown, D., Duboc, N., Dzieciuch, M., Egedal, J., Giani, P., Guo, X., Gysi, A., Haan, T., Hanson, D., Hanson, D., Hardgrove, C., Hariharan, J., Hicks, J., Isella, A., Jiang, W., Karatekin, O., Knights, D., Lader, R., Lai, D., Langley, A., Lewis, K., Li, W., Liu, J., Malik, N., Matthaeus, B., Mosta, P., Munro, P., Munsky, B., Pecora, F., Rajaram, H., Raychaudhuri, D., Robinson, D., Rolland, L., Roytershteyn, V., Roytershteyn, V., Seitz, T., Shkoller, S., Sonnenfeld, R., Steadman, C., Suazo, D., Toigo, A., Vargas, R., Worcester, P., Yang, L., Yang, Y., Yedinak, K., Alcorn, C. D., Alexandrov, B., Asay-Davis, X. S., Aulwes, R. T., Balkey, S. L., Barthel, A. M., Begeman, C. B., Boukhalfa, H., Caldwell, W. K., Canfield, J. M., Carter, K. R., Conry, P. T., Coupland, D. D. S., Daughton, W. S., De, S., Delzanno, G. L., Dempsey, A. M., Donahue, C. M., Duboc, N., Elliott, S. M., Essunfeld, A., Falato, M. J., Freeman, M. S., Friedel, R. H. W., Froment, M., Fryer, C. L., Gao, K., Goldberg, E. E., Greess, S. M., Guo, F., Guzik, J. A., Harp, D. R., Hecht, M. W., Huang, C., Hunke, E. C., Karpov, P., Karra, S., Kilian, P. F. H., Kim, D., King, B. L., Koo, E., Korobkin, O., Koshkarov, O., Kroeger, M. E., Larsen, B. A., Lee, Y., Lee, J. E., Legett, C., Legett, S. A., Lei, Z., Li, H., Li, Z., Li, S., Li, M., Lin, Y., Lippuner, J., Maier, N. T., Maldonado, C. A., Mariam, F. G., Mendis Jayasinghe, A., Mesick, K. E., Migdissov, A., Misch, G. W., Mumpower, M. R., Negi, S., Nisbet, H. D., Noh, S. J., Nowicki, S. F., Ollila, A. M., Perez, D. M., Perkins, G. B., Pilania, G., Piliouras, A., Pinilla-Orjuela, M. I., Poulson, D. C., Quinn, H. M., Ren, C. X., Renner, C. J., Resendiz Lira, P. A., Roberts, P. M., Rodarte, K. A., Rowland, J. C., Sadler, J. D., Sagert, I., Salvesen, G. M., Shin, T. H. S., Singer Kruse, C. P., Sprouse, T. M., Sudasinghe, N. M., Svyatsky, D., Thomas, L. N., Turonova, Z., Van Roekel, L., Vesselinov, V. V., Voit, S. J., Wang, T., Wender, S. A., Wiens, R. C., Wilson, G. R., Xu, H., Zhang, X., Chase, E. A., Shin, S., Banesh, D., Broll, J. M., Bujack, R. B., DeSantis, D. F., Dolgopolova, E., Engel, M. A., Gasda, P. J., Jordanova, V. K., Kunde, Y. A., Miller, J. M., Morley, S. K., Reinisch, E. C., Shao, X., Kondev, F., Maulik, R., Feng, S., Hollingsworth, J. A., Kim, M. & Jackiewicz, J.
10/1/20 → 09/30/23
Project: Other
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From 1-Dimensional Sequence to 3-Dimensional Genomes: An Exascale Human Genome Project for the Next Generation of Biological Inquiry
Starkenburg, S. R., Sanbonmatsu, K. Y. & Modl, D. G.
01/21/20 → 09/30/20
Project: Other
Prizes
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Distinguished Performance Award
Banerjee, Shounak (Recipient), Batrice, Rami John (Recipient), Dale, Taraka T (Recipient), Dumont, Joseph Henry (Recipient), Gonzalez Esquer, Cesar Raul (Recipient), Hernandez, Marcos Mateo (Recipient), Iverson, Carl Nicholas (Recipient), Jacobs, Lindsey Lydia (Recipient), Janicke, Michael Timothy (Recipient), Lalonde, Jessica Nicole (Recipient), Lee, Kwan-Soo (Recipient), Marrone, Babetta Louise (Recipient), Pilania, Ghanshyam (Recipient), Starkenburg, Shawn Robert (Recipient), Sudasinghe, Nilusha Maduwanthi (Recipient), Theiler, James Patrick (Recipient) & Yoshida, Thomas M (Recipient), 2022
Prize: Award
Press/Media
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Improving data quality of algal genomics
Erik Richard Hanschen,, Blake Hovde, & Shawn Robert Starkenburg,
03/1/21
1 item of Media coverage
Press/Media: STE Highlight
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Made by Microbes
Anand Kumar, Taraka T Dale, Carl N. Iverson, Ghanshyam Pilania, Ramesh Jha, & Shawn Robert Starkenburg,
08/1/20
1 item of Media coverage
Press/Media: 1663
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Boosting biofuels and reducing plant waste—algae that does it all
Amanda N. Barry, Brian W. Vogler, Shawn Robert Starkenburg,, Nilusha Maduwanthi Sudasinghe Appuhamilage, Jenna Y. Schambach, Joseph A. Rollin & Sivakumar Pattathil
08/1/20
1 item of Media coverage
Press/Media: STE Highlight
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The greenhouse that supports our nation: From biofuel to environmental research
Sanna Annika Sevanto,, Dea Musa, Emma Ruddock Lathrop, Helen Cui, Scott Nicholas Twary, Chris M. Yeager, Shawn Robert Starkenburg, & Lee Thoresen Dickman,
03/25/20
1 item of Media coverage
Press/Media: STE Highlight
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Sequence and transcriptome analysis of microalga reveal potential applications
Shawn Robert Starkenburg,, Ramesh Jha,, Blake Hovde,, Chloe R. Deodato, Heather M. Hunsperger, Scott A. Ryken, Will Yost, Johnathan Patterson, Raymond J. Monnat, Rose A. Cattolico & Steven B. Barlow
12/23/15
1 item of Media coverage
Press/Media: STE Highlight